Location, location, location: where is key for CAR T-cell therapy

From the Walter lab, Translational Science and Therapeutics Division

Dr. Walter and I are clinicians, who treat patients with acute myeloid leukemia (AML) and see far too many die from relapsed/refractory disease,” explains Dr. Sam Fiorenza, physician-scientist and first author on a recent article published in Molecular Therapy Oncology. A collaboration between members of Dr. Cameron Turtle's lab (formerly at Fred Hutch and now at the University of Sydney) and Dr. Roland Walter's lab, their article describes the development and preclinical testing of a novel immunotherapy to treat AML patients. 

After diagnosis, AML patients typically receive a regimen of chemotherapy drugs designed to clear the blood and bone marrow of leukemia cells and put the cancer into remission—so-called “remission induction therapy”. Although many patients are successfully treated in this way, a substantial proportion of patients relapse or are refractory to the treatment. For these patients, there are very few reliable treatment options and their prognosis is poor. 

Targeted approaches to treat AML have focused on CD33, a cell-surface protein that is found on virtually all AML cells, although the level of expression is found to vary widely between and even within patients. Several different approaches to targeting CD33 on AML cells have been investigated but have not been a resounding success as was hoped. In 2000, Mylotarg, a CD33 antibody-drug conjugate (ADC) that delivers a potent chemotherapy drug to CD33-expressing cells, was approved for the treatment of AML. Of note, Mylotarg was developed through the work of Dr. Irv Bernstein at the Hutch in the 1990s.  Despite widespread CD33 expression, many AML patients do not respond to Mylotarg and other ADCs targeting CD33 have failed in clinical trials. Therefore, efforts are ongoing to develop more potent CD33-targeted therapies.

An alternative approach in development is chimeric antigen receptor (CAR)-T cell therapy, in which T cells from a cancer patient are reprogrammed to recognize and kill cancer cells. “In CAR-T cell therapy, a specific protein on the surface of the tumor is targeted (CD33 for AML) by the genetically modified CAR-T cells,” explains Dr. Fiorenza. “CAR-T cell therapy has been successfully used to treat another leukemia, B-cell Acute Lymphoblastic Leukemia (B-ALL). Yet responses in AML have been underwhelming.” 

One explanation for why CD33-targeted ADCs and CAR-T cells are not efficiently killing CD33-expressing AML cells is that they may not be targeting the most optimal part of the CD33 molecule. CD33 contains two extracellular domains: the V-set and C2-set. Current CD33 ADCs and CAR-T cells recognize the V-set, which is located at the N terminus of the protein, further from the cell membrane. “Previous studies, including those from our own laboratory, have shown that the part of the V-set targeted by these existing antibodies may restrain the full force of immunotherapy by not creating the optimal T-to-tumor cell interaction,” says Dr. Fiorenza. Another possibility is that AML cells can produce alternatively spliced CD33 molecules that lack the V-set but retain the C2-set. Therefore, these CD33 isoforms won’t be recognized by current CD33-targeted therapies.

The Walter-Turtle lab team developed chimeric antigen receptor (CAR)-T cells that recognize the membrane-proximal C2-set domain of CD33 found in all CD33 isoforms (CD33PAN). CD33PAN CAR-T cells display enhanced leukemic cell killing in vitro and in vivo compared to CAR-T cells that target the membrane-distal CD33 V-set domain (CD33V-set CAR-T).
The Walter-Turtle lab team developed chimeric antigen receptor (CAR)-T cells that recognize the membrane-proximal C2-set domain of CD33 found in all CD33 isoforms (CD33PAN). CD33PAN CAR-T cells display enhanced leukemic cell killing in vitro and in vivo compared to CAR-T cells that target the membrane-distal CD33 V-set domain (CD33V-set CAR-T). Image provided by Dr. Sam Fiorenza

To address these two concerns, the Walter-Turtle lab team decided to generate and evaluate the efficacy of CARs, which they named CD33PAN CARs, that recognize the more membrane-proximal C2-set found in all CD33 isoforms. They found that targeting CD33’s C2-set significantly increases CAR-T cell mediated killing in vitro compared to CAR-T cells targeting the V-set domain, using both established and primary AML cell lines. Furthermore, CD33PAN CAR-T cells produced leukemic cell clearance in vivo in mice bearing human AML cell xenografts. 

A fascinating finding from their paper was that CD33PAN CAR-T cells displayed enhanced killing of leukemic cells from patients with relapsed/refractory AML. “In fact, we also find that there are more detectable CD33 C2-set components on the surface of leukemic stem cells in patients with relapsed/refractory AML. This may indicate that by targeting the C2-set we are increasing the killing of the stem cells—the AML cells thought to be responsible for relapse,” reveals Dr. Fiorenza. “Our findings pave the way for future clinical trials of CAR-T cells that target the C2-set of CD33.” 


The spotlighted research was funded by the National Institutes of Health and the Haematology Society of Australia and New Zealand.

Fred Hutch/University of Washington/Seattle Children's Cancer Consortium members Drs. Roland Walter and Hans-Peter Kiem contributed to this work.

Fiorenza S, Lim SYT, Laszlo GS, Kimble EL, Phi T-D, Lunn-tHalbert MC, Kirchmeier DR, Huo J, Kiem H-P, Turtle CJ, Walter RB. 2024. Targeting the membrane-proximal C2-set domain of CD33 for improve CAR T cell therapy. Molecular Therapy Oncology 32(3):200854.  

Nick Salisbury

Nick Salisbury is a postdoctoral fellow in the Galloway lab at Fred Hutch. Originally from UK, he completed his BA and PhD at University of Cambridge before moving to US in 2016. Nick's research focuses on understanding how DNA viruses, such as Merkel cell polyomavirus, cause cancer and developing new virally-targeted therapies to treat these diseases. When not in the lab or reading and writing about journal articles, Nick doesn't like to sit still and enjoys hiking in the Cascades with his Malamute/German Shepherd dog, Tate, cycling and Crossfit.